Sequence alignment

Results: 764



#Item
191

2006 Paper 8 Question 13 Bioinformatics (a) Why do we use dynamic programming algorithms for pairwise sequence alignment problems but not for multiple pairwise alignment? [5 marks]

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Source URL: www.cl.cam.ac.uk

- Date: 2014-06-09 10:18:14
    192Science / Genetic mapping / Computational phylogenetics / Sequence alignment / Human genome / Genome / BLAST / Phrap / Beijing Genomics Institute / Bioinformatics / Genetics / Genomics

    Large-scale sequence comparison: Spaced seeds and suffix arrays Martin C. Frith Computational Biology Research Center, AIST, Tokyo

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    Source URL: last.cbrc.jp

    Language: English - Date: 2008-12-23 00:54:27
    193Structural genomics / Sequence alignment / EVA / Membrane protein / Membrane topology / Proteome / UniProt / Protein targeting / Protein–protein interaction prediction / Biology / Bioinformatics / Science

    The human transmembrane proteome

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    Source URL: www.biologydirect.com

    Language: English
    194

    2010 Paper 7 Question 5 Bioinformatics (a) Discuss the space–time complexity of dynamic programming algorithms in sequence alignment. [7 marks]

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    Source URL: www.cl.cam.ac.uk

    - Date: 2014-06-09 10:18:35
      195Bioinformatics / RNA splicing / Spliceosome / Statistics / Gene expression / Hidden Markov model / Viterbi algorithm / Sequence alignment / Markov chain / Markov models / Genetics / Biology

      © 2004 Nature Publishing Group http://www.nature.com/naturebiotechnology _computational BIOLOGY PRIMER

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      Source URL: selab.janelia.org

      Language: English - Date: 2014-09-02 13:40:56
      196Biology / BLOSUM / Substitution matrix / Sequence alignment / Smith–Waterman algorithm / Multiple sequence alignment / BLAST / Nucleic acid sequence / Matrix / Bioinformatics / Computational phylogenetics / Science

      2014 22nd International Conference on Pattern Recognition S-BLOSUM: classification of 2D shapes with biological sequence alignment Pietro Lovato∗ , Alessio Milanese† , Cesare Centomo† , Alejandro Giorgetti† , M

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      Source URL: profs.sci.univr.it

      Language: English - Date: 2015-06-16 09:42:08
      197HMMER / Sequence alignment / FASTA / BLAST / Sequence analysis / Hidden Markov model / Smith–Waterman algorithm / BLOSUM / Homology modeling / Bioinformatics / Science / Computational phylogenetics

      Genome InformaticsPages)

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      Source URL: selab.janelia.org

      Language: English - Date: 2014-09-02 13:40:00
      198Protein structure / Biological databases / Computational phylogenetics / Proteins / Sequence alignment / Structural Classification of Proteins / CATH / Homology / Protein family / Biology / Science / Bioinformatics

      NIH Public Access Author Manuscript Comput Biol Chem. Author manuscript; available in PMC 2012 February 1. NIH-PA Author Manuscript

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      Source URL: www.ncbi.nlm.nih.gov

      Language: English
      199Genetics / Sequence alignment / Dynamic programming / Multiple sequence alignment / Nucleic acid structure prediction / T-Coffee / Hidden Markov model / Smith–Waterman algorithm / Nucleic acid sequence / Computational phylogenetics / Bioinformatics / Science

      The Partition Function Variant of Sankoff ’s Algorithm Ivo L. Hofacker1 and Peter F. Stadler1,2 1 Institut f¨

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      Source URL: www.bioinf.uni-leipzig.de

      Language: English - Date: 2004-01-30 07:21:50
      200Computational phylogenetics / Protein methods / Mathematical and theoretical biology / Structural alignment / Protein structure / Sequence alignment / STING / Needleman–Wunsch algorithm / Protein domain / Science / Bioinformatics / Biology

      BMC Bioinformatics This Provisional PDF corresponds to the article as it appeared upon acceptance. Fully formatted PDF and full text (HTML) versions will be made available soon. SABERTOOTH: protein structural alignment b

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      Source URL: ub.cbm.uam.es

      Language: English - Date: 2015-05-25 09:53:34
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